Analytical Genomics / Publications / Statistical Genomics and Biological Physics

Improvement in protein domain identification is reached by breaking consensus, with the agreement of many profiles and domain co-occurrence

Bernardes J., Zaverucha G., Vaquero C., Carbone A. PLOS Computational Biology (2016)

Comments Off on Improvement in protein domain identification is reached by breaking consensus, with the agreement of many profiles and domain co-occurrence

29 July 2016

Publications / Statistical Genomics and Biological Physics

Evaluation and improvements of clustering algorithms for detecting remote homologous protein families.

Bernardes J., Vieira F., Costa L., Zaverucha G. BMC Bioinformatics (2015)

Comments Off on Evaluation and improvements of clustering algorithms for detecting remote homologous protein families.

1 December 2015

Analytical Genomics / Publications / Statistical Genomics and Biological Physics

A multi-objective optimization approach accurately resolves protein domain architectures.

Bernardes J., Vieira F., Zaverucha G., Carbone A. Bioinformatics (2015)

Comments Off on A multi-objective optimization approach accurately resolves protein domain architectures.

1 January 2015

Analytical Genomics / Publications

A discriminative method for family-based protein remote homology detection that combines inductive logic programming and propositional models.

Bernardes J., Carbone A., Zaverucha G. BMC Bioinformatics (2011)

Comments Off on A discriminative method for family-based protein remote homology detection that combines inductive logic programming and propositional models.

1 December 2011

Publications / Statistical Genomics and Biological Physics

Remote Homology Detection Through Discriminative Statistical Relational Learning

Unknown Authors Lecture Notes in Computer Science (2005)

Comments Off on Remote Homology Detection Through Discriminative Statistical Relational Learning

1 January 2005