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Laboratory of Computational, Quantitative and Synthetic Biology (CQSB)
UMR 7238 CNRS - Sorbonne Université
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Publications / Statistical Genomics and Biological Physics

Mutator genomes decay, despite sustained fitness gains, in a long-term experiment with bacteria

Couce A., Caudwell L., Feinauer C., Hindré T., Feugeas J., Weigt M., Lenski R., Schneider D., Tenaillon O. Proceedings of the National Academy of Sciences (2017)

Comments Off on Mutator genomes decay, despite sustained fitness gains, in a long-term experiment with bacteria
24 October 2017
Publications / Statistical Genomics and Biological Physics

Large-scale identification of coevolution signals across homo-oligomeric protein interfaces by direct coupling analysis

Uguzzoni G., John Lovis S., Oteri F., Schug A., Szurmant H., Weigt M. Proceedings of the National Academy of Sciences (2017)

Comments Off on Large-scale identification of coevolution signals across homo-oligomeric protein interfaces by direct coupling analysis
28 March 2017
Publications / Statistical Genomics and Biological Physics

De la variabilité des séquences à la prédiction structurale et fonctionnelle : modélisation de familles de protéines homologues.

Barrat-Charlaix P., Weigt M. Biologie Aujourd'hui (2017)

Comments Off on De la variabilité des séquences à la prédiction structurale et fonctionnelle : modélisation de familles de protéines homologues.
1 January 2017
Publications / Statistical Genomics and Biological Physics

Improving landscape inference by integrating heterogeneous data in the inverse Ising problem

Barrat-Charlaix P., Figliuzzi M., Weigt M. Scientific Reports (2016)

Comments Off on Improving landscape inference by integrating heterogeneous data in the inverse Ising problem
25 November 2016
Publications / Statistical Genomics and Biological Physics

Direct coevolutionary couplings reflect biophysical residue interactions in proteins

Coucke A., Uguzzoni G., Oteri F., Cocco S., Monasson R., Weigt M. The Journal of Chemical Physics (2016)

Comments Off on Direct coevolutionary couplings reflect biophysical residue interactions in proteins
7 November 2016
Publications / Statistical Genomics and Biological Physics

Inter-Protein Sequence Co-Evolution Predicts Known Physical Interactions in Bacterial Ribosomes and the Trp Operon

Feinauer C., Szurmant H., Weigt M., Pagnani A. PLOS ONE (2016)

Comments Off on Inter-Protein Sequence Co-Evolution Predicts Known Physical Interactions in Bacterial Ribosomes and the Trp Operon
16 February 2016
Publications / Statistical Genomics and Biological Physics

Direct-Coupling Analysis of nucleotide coevolution facilitates RNA secondary and tertiary structure prediction.

De Leonardis E., Lutz B., Ratz S., Cocco S., Monasson R., Schug A., Weigt M. Nucleic Acids Research (2015)

Comments Off on Direct-Coupling Analysis of nucleotide coevolution facilitates RNA secondary and tertiary structure prediction.
1 January 2015
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