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Laboratory of Computational, Quantitative and Synthetic Biology (CQSB)

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    • Adaptation, Intégration, Reticulation, Evolution (AIRE)
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    • Biology of Genomes
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    • Epigenetics and RNA Metabolism in Human Diseases
    • Functional Imaging Of Nuclear Architecture (FIONA)
    • Genetic Networks
    • Horizontal Evolution of Algal Lifestyles (HEAL)
    • Molecular Modeling and Drug Discovery (M2D2)
    • Proteome Diversification in Evolution
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CNRS-grand-1200pxl-f40
Laboratory of Computational, Quantitative and Synthetic Biology (CQSB)
UMR 7238 CNRS - Sorbonne Université
logo
CNRS-grand-1200pxl-f40
  • Home
  • Research
    • Publications
    • Softwares
    • Projects
    • All Teams
    • Alumni
  • Teams
    • Adaptation, Intégration, Reticulation, Evolution (AIRE)
    • Analytical Genomics
    • Biology of Genomes
    • Computational Medicine
    • Epigenetics and RNA Metabolism in Human Diseases
    • Functional Imaging Of Nuclear Architecture (FIONA)
    • Genetic Networks
    • Horizontal Evolution of Algal Lifestyles (HEAL)
    • Molecular Modeling and Drug Discovery (M2D2)
    • Proteome Diversification in Evolution
    • Statistical Genomics and Biological Physics
    • Synthetic and Systems Biology of Microalgae
    • Systems Engineering and Evolution Dynamics (SEED)
    • Telomere & Genome Stability
  • Events
    • All News
    • Seminars
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  • Master BIM
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  • Home
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  • Teams
    • Adaptation, Intégration, Reticulation, Evolution (AIRE)
    • Analytical Genomics
    • Biology of Genomes
    • Computational Medicine
    • Epigenetics and RNA Metabolism in Human Diseases
    • Functional Imaging Of Nuclear Architecture (FIONA)
    • Genetic Networks
    • Horizontal Evolution of Algal Lifestyles (HEAL)
    • Molecular Modeling and Drug Discovery (M2D2)
    • Proteome Diversification in Evolution
    • Statistical Genomics and Biological Physics
    • Synthetic and Systems Biology of Microalgae
    • Systems Engineering and Evolution Dynamics (SEED)
    • Telomere & Genome Stability
  • Events
    • All News
    • Seminars
    • Meeting
  • Master BIM
  • Open positions
logo
CNRS-grand-1200pxl-f40
  • Home
  • Research
    • Publications
    • Softwares
    • Projects
    • All Teams
    • Alumni
  • Teams
    • Adaptation, Intégration, Reticulation, Evolution (AIRE)
    • Analytical Genomics
    • Biology of Genomes
    • Computational Medicine
    • Epigenetics and RNA Metabolism in Human Diseases
    • Functional Imaging Of Nuclear Architecture (FIONA)
    • Genetic Networks
    • Horizontal Evolution of Algal Lifestyles (HEAL)
    • Molecular Modeling and Drug Discovery (M2D2)
    • Proteome Diversification in Evolution
    • Statistical Genomics and Biological Physics
    • Synthetic and Systems Biology of Microalgae
    • Systems Engineering and Evolution Dynamics (SEED)
    • Telomere & Genome Stability
  • Events
    • All News
    • Seminars
    • Meeting
  • Master BIM
  • Open positions
  • Home
  • Research
    • Publications
    • Softwares
    • Projects
    • All Teams
    • Alumni
  • Teams
    • Adaptation, Intégration, Reticulation, Evolution (AIRE)
    • Analytical Genomics
    • Biology of Genomes
    • Computational Medicine
    • Epigenetics and RNA Metabolism in Human Diseases
    • Functional Imaging Of Nuclear Architecture (FIONA)
    • Genetic Networks
    • Horizontal Evolution of Algal Lifestyles (HEAL)
    • Molecular Modeling and Drug Discovery (M2D2)
    • Proteome Diversification in Evolution
    • Statistical Genomics and Biological Physics
    • Synthetic and Systems Biology of Microalgae
    • Systems Engineering and Evolution Dynamics (SEED)
    • Telomere & Genome Stability
  • Events
    • All News
    • Seminars
    • Meeting
  • Master BIM
  • Open positions
Analytical Genomics / Publications

iBIS2Analyzer: a web server for a phylogeny-driven coevolution analysis of protein families

Oteri F., Sarti E., Nadalin F., Carbone A. Nucleic Acids Research (2022)

Comments Off on iBIS2Analyzer: a web server for a phylogeny-driven coevolution analysis of protein families
5 July 2022
Analytical Genomics / Publications

MyCLADE: a multi-source domain annotation server for sequence functional exploration

Vicedomini R., Blachon C., Oteri F., Carbone A. Nucleic Acids Research (2021)

Comments Off on MyCLADE: a multi-source domain annotation server for sequence functional exploration
2 July 2021
Analytical Genomics / Publications

COVTree: Coevolution in OVerlapped sequences by Tree analysis server.

Teppa E., Zea D., Oteri F., Carbone A. Nucleic Acids Research (2020)

Comments Off on COVTree: Coevolution in OVerlapped sequences by Tree analysis server.
2 July 2020
Analytical Genomics / Publications

BIS2Analyzer: a server for coevolution analysis of conserved protein families

Oteri F., Nadalin F., Champeimont R., Carbone A. Nucleic Acids Research (2017)

Comments Off on BIS2Analyzer: a server for coevolution analysis of conserved protein families
3 July 2017
Publications / Statistical Genomics and Biological Physics

Large-scale identification of coevolution signals across homo-oligomeric protein interfaces by direct coupling analysis

Uguzzoni G., John Lovis S., Oteri F., Schug A., Szurmant H., Weigt M. Proceedings of the National Academy of Sciences (2017)

Comments Off on Large-scale identification of coevolution signals across homo-oligomeric protein interfaces by direct coupling analysis
28 March 2017
Publications / Statistical Genomics and Biological Physics

Direct coevolutionary couplings reflect biophysical residue interactions in proteins

Coucke A., Uguzzoni G., Oteri F., Cocco S., Monasson R., Weigt M. The Journal of Chemical Physics (2016)

Comments Off on Direct coevolutionary couplings reflect biophysical residue interactions in proteins
7 November 2016
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UMR 7238 CNRS
Sorbonne Université

UMR 7238 CNRS

Sorbonne Université

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