Analytical Genomics / Publications

LEVELNET to visualize, explore, and compare protein–protein interaction networks

Mohseni Behbahani, Y., Saighi, P., Corsi, F., Laine, E., Carbone, A.. PROTEOMICS (2023)

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4 July 2023

Publications / Statistical Genomics and Biological Physics

Generating interacting protein sequences using domain-to-domain translation

Meynard-Piganeau B., Fabbri C., Weigt M., Pagnani A., Feinauer C. Bioinformatics (2023)

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1 July 2023

Adaptation, Intégration, Reticulation, Evolution (AIRE) / Publications

Critical Assessment of Methods for Predicting the 3D Structure of Proteins and Protein Complexes

Wodak, S., Vajda, S., Lensink, M., Kozakov, D., Bates, P.. Annual Review of Biophysics (2023)

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9 May 2023

Publications / Statistical Genomics and Biological Physics

Combining phylogeny and coevolution improves the inference of interaction partners among paralogous proteins

Gandarilla-Pérez C., Pinilla S., Bitbol A., Weigt M. PLOS Computational Biology (2023)

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30 March 2023

Publications / Statistical Genomics and Biological Physics

Machine-learning-assisted Monte Carlo fails at sampling computationally hard problems

Ciarella S., Trinquier J., Weigt M., Zamponi F. Machine Learning: Science and Technology (2023)

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1 March 2023

Analytical Genomics / Publications

A layer cake model for plant and metazoan chromatin

Carron, L., Concia, L., Grob, S., Barneche, F., Carbone, A., Mozziconacci, J.. Preprint (2023)

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27 February 2023

Publications / Synthetic and Systems Biology of Microalgae

Ribulose-1,5-bisphosphate regeneration in the Calvin-Benson-Bassham cycle: Focus on the last three enzymatic steps that allow the formation of Rubisco substrate

Meloni, M., Gurrieri, L., Fermani, S., Velie, L., Sparla, F., Crozet, P., Henri, J., Zaffagnini, M. Frontiers in Plant Science (2023)

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16 February 2023