Analytical Genomics / Publications

Parseq: reconstruction of microbial transcription landscape from RNA-Seq read counts using state-space models.

Mirauta B., Nicolas P., Richard H. Bioinformatics (2014)

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1 January 2014

Publications / Statistical Genomics and Biological Physics

Direct Coupling Analysis for Protein Contact Prediction

Morcos F., Hwa T., Onuchic J., Weigt M. Methods in Molecular Biology (2014)

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1 January 2014

Mathematical Modeling in Biology / Publications

Adaptation and fatigue model for neuron networks and large time asymptotics in a nonlinear fragmentation equation

Pakdaman K., Perthame B., Salort D. The Journal of Mathematical Neuroscience (2014)

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1 January 2014

Publications / Statistical Genomics and Biological Physics

Perturbation biology: inferring signaling networks in cellular systems.

Molinelli E., Korkut A., Wang W., Miller M., Gauthier N., Jing X., Kaushik P., He Q., Mills G., Solit D., Pratilas C., Weigt M., Braunstein A., Pagnani A., Zecchina R., Sander C. PLoS Computational Biology (2013)

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19 December 2013

Publications / Statistical Genomics and Biological Physics

Inference of Hopfield-Potts patterns from covariation in protein families: calculation and statistical error bars

Unknown Authors Journal of Physics: Conference Series (2013)

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16 December 2013

Analytical Genomics / Publications

Protein-protein interactions in a crowded environment: an analysis via cross-docking simulations and evolutionary information.

Lopes A., Sacquin-Mora S., Dimitrova V., Laine E., Ponty Y., Carbone A. PLoS Computational Biology (2013)

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5 December 2013

Genetic Networks / Publications

High-frequency promoter firing links THO complex function to heavy chromatin formation.

Mouaikel J., Causse S., Rougemaille M., Daubenton-Carafa Y., Blugeon C., Lemoine S., Devaux F., Darzacq X., Libri D. Cell Reports (2013)

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1 November 2013