Analytical Genomics / Publications

Vanishing boosted weights: a consistent algorithm to learn interpretable rules

Sokolovska N., Behbahani Y. Pattern Recognition Letters (2021)

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1 December 2021

Analytical Genomics / Publications

Protein sequence-to-structure learning: Is this the end(-to-end revolution)?

Laine E., Eismann S., Elofsson A., Grudinin S. Proteins: Structure, Function, and Bioinformatics (2021)

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1 December 2021

Publications / Statistical Genomics and Biological Physics

adabmDCA: adaptive Boltzmann machine learning for biological sequences

Muntoni A., Pagnani A., Weigt M., Zamponi F. BMC Bioinformatics (2021)

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1 December 2021

Publications / Telomere & Genome Stability

Telomere shortening causes distinct cell division regimes during replicative senescence in Saccharomyces cerevisiae.

Martin H., Doumic M., Teixeira M., Xu Z. Cell & Bioscience (2021)

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1 December 2021

Genetic Networks / Publications

Yap5 Competes With Hap4 for the Regulation of Iron Homeostasis Genes in the Human Pathogen

Delaveau T., Thiébaut A., Benchouaia M., Merhej J., Devaux F. Frontiers in Cellular and Infection Microbiology (2021)

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26 November 2021

Publications / Statistical Genomics and Biological Physics

Efficient generative modeling of protein sequences using simple autoregressive models

Trinquier J., Uguzzoni G., Pagnani A., Zamponi F., Weigt M. Nature Communications (2021)

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4 October 2021

Publications / Statistical Genomics and Biological Physics

Sparse generative modeling via parameter reduction of Boltzmann machines: Application to protein-sequence families

Barrat-Charlaix P., Muntoni A., Shimagaki K., Weigt M., Zamponi F. Physical Review E (2021)

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6 August 2021