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Laboratory of Computational, Quantitative and Synthetic Biology (CQSB)
UMR 7238 CNRS - Sorbonne Université
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    • Functional Imaging Of Nuclear Architecture (FIONA)
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    • Horizontal Evolution of Algal Lifestyles (HEAL)
    • Molecular Modeling and Drug Discovery (M2D2)
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    • Functional Imaging Of Nuclear Architecture (FIONA)
    • Genetic Networks
    • Horizontal Evolution of Algal Lifestyles (HEAL)
    • Molecular Modeling and Drug Discovery (M2D2)
    • Proteome Diversification in Evolution
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    • Adaptation, Intégration, Reticulation, Evolution (AIRE)
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    • Epigenetics and RNA Metabolism in Human Diseases
    • Functional Imaging Of Nuclear Architecture (FIONA)
    • Genetic Networks
    • Horizontal Evolution of Algal Lifestyles (HEAL)
    • Molecular Modeling and Drug Discovery (M2D2)
    • Proteome Diversification in Evolution
    • Statistical Genomics and Biological Physics
    • Synthetic and Systems Biology of Microalgae
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Analytical Genomics / Publications

BIS2Analyzer: a server for coevolution analysis of conserved protein families

Oteri F., Nadalin F., Champeimont R., Carbone A. Nucleic Acids Research (2017)

Comments Off on BIS2Analyzer: a server for coevolution analysis of conserved protein families
3 July 2017
Analytical Genomics / Publications

Marine diatoms change their gene expression profile when exposed to microscale turbulence under nutrient replete conditions

Amato A., Dell’Aquila G., Musacchia F., Annunziata R., Ugarte A., Maillet N., Carbone A., Ribera d’Alcalà M., Sanges R., Iudicone D., Ferrante M. Scientific Reports (2017)

Comments Off on Marine diatoms change their gene expression profile when exposed to microscale turbulence under nutrient replete conditions
19 June 2017
Genetic Networks / Publications

The CCAAT-Binding Complex Controls Respiratory Gene Expression and Iron Homeostasis in Candida Glabrata

Unknown Authors Scientific Reports (2017)

Comments Off on The CCAAT-Binding Complex Controls Respiratory Gene Expression and Iron Homeostasis in Candida Glabrata
14 June 2017
Genetic Networks / Publications

Mediator, SWI/SNF and SAGA complexes regulate Yap8-dependent transcriptional activation of ACR2 in response to arsenate.

Unknown Authors Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms (2017)

Comments Off on Mediator, SWI/SNF and SAGA complexes regulate Yap8-dependent transcriptional activation of ACR2 in response to arsenate.
1 April 2017
Publications / Synthetic and Systems Biology of Microalgae

Modulation of the specific glutathionylation of mitochondrial proteins in the yeast Saccharomyces cerevisiae under basal and stress conditions

Gergondey R., Garcia C., Marchand C., Lemaire S., Camadro J., Auchère F. Biochemical Journal (2017)

Comments Off on Modulation of the specific glutathionylation of mitochondrial proteins in the yeast Saccharomyces cerevisiae under basal and stress conditions
1 April 2017
Publications / Statistical Genomics and Biological Physics

Large-scale identification of coevolution signals across homo-oligomeric protein interfaces by direct coupling analysis

Uguzzoni G., John Lovis S., Oteri F., Schug A., Szurmant H., Weigt M. Proceedings of the National Academy of Sciences (2017)

Comments Off on Large-scale identification of coevolution signals across homo-oligomeric protein interfaces by direct coupling analysis
28 March 2017
Analytical Genomics / Publications

JET2 Viewer: a database of predicted multiple, possibly overlapping, protein-protein interaction sites for PDB structures

Ripoche H., Laine E., Ceres N., Carbone A. Nucleic Acids Research (2017)

Comments Off on JET2 Viewer: a database of predicted multiple, possibly overlapping, protein-protein interaction sites for PDB structures
4 January 2017
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