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Laboratory of Computational, Quantitative and Synthetic Biology (CQSB)

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Laboratory of Computational, Quantitative and Synthetic Biology (CQSB)
UMR 7238 CNRS - Sorbonne Université
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    • Functional Imaging Of Nuclear Architecture (FIONA)
    • Genetic Networks
    • Horizontal Evolution of Algal Lifestyles (HEAL)
    • Molecular Modeling and Drug Discovery (M2D2)
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    • Functional Imaging Of Nuclear Architecture (FIONA)
    • Genetic Networks
    • Horizontal Evolution of Algal Lifestyles (HEAL)
    • Molecular Modeling and Drug Discovery (M2D2)
    • Proteome Diversification in Evolution
    • Statistical Genomics and Biological Physics
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    • Adaptation, Intégration, Reticulation, Evolution (AIRE)
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    • Biology of Genomes
    • Computational Medicine
    • Epigenetics and RNA Metabolism in Human Diseases
    • Functional Imaging Of Nuclear Architecture (FIONA)
    • Genetic Networks
    • Horizontal Evolution of Algal Lifestyles (HEAL)
    • Molecular Modeling and Drug Discovery (M2D2)
    • Proteome Diversification in Evolution
    • Statistical Genomics and Biological Physics
    • Synthetic and Systems Biology of Microalgae
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    • Telomere & Genome Stability
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Analytical Genomics / Publications

Multiple probabilistic models extract features from protein sequence data and resolve functional diversity of very different protein families

Vicedomini R., Bouly J., Laine E., Falciatore A., Carbone A. Preprint (2019)

Comments Off on Multiple probabilistic models extract features from protein sequence data and resolve functional diversity of very different protein families
1 January 2019
Mathematical Modeling in Biology / Publications

Adaptive dynamics of hematopoietic stem cells and their supporting stroma: A model and mathematical analysis

Nam Nguyen T., , Clairambault J., Jaffredo T., Perthame B., Salort D., , Mathematical Biosciences and Engineering (2019)

Comments Off on Adaptive dynamics of hematopoietic stem cells and their supporting stroma: A model and mathematical analysis
1 January 2019
Mathematical Modeling in Biology / Publications

Derivation of a voltage density equation from a voltage-conductance kinetic model for networks of Integrate-and-Fire neurons

Perthame B., Salort D. Communications in Mathematical Sciences (2019)

Comments Off on Derivation of a voltage density equation from a voltage-conductance kinetic model for networks of Integrate-and-Fire neurons
1 January 2019
Publications / Telomere & Genome Stability

Adaptation to DNA damage checkpoint in senescent telomerase-negative cells promotes genome instability.

Coutelier H., Xu Z., Morisse M., Lhuillier-Akakpo M., Pelet S., Charvin G., Dubrana K., Teixeira M. Genes & Development (2018)

Comments Off on Adaptation to DNA damage checkpoint in senescent telomerase-negative cells promotes genome instability.
1 December 2018
Analytical Genomics / Publications

DiNAMO: highly sensitive DNA motif discovery in high-throughput sequencing data

Saad C., Noé L., Richard H., Leclerc J., Buisine M., Touzet H., Figeac M. BMC Bioinformatics (2018)

Comments Off on DiNAMO: highly sensitive DNA motif discovery in high-throughput sequencing data
1 December 2018
Analytical Genomics / Publications / Statistical Genomics and Biological Physics

A multi-source domain annotation pipeline for quantitative metagenomic and metatranscriptomic functional profiling

Ugarte A., Vicedomini R., Bernardes J., Carbone A. Microbiome (2018)

Comments Off on A multi-source domain annotation pipeline for quantitative metagenomic and metatranscriptomic functional profiling
1 December 2018
Publications / Synthetic and Systems Biology of Microalgae

Crystal Structure of Chloroplastic Thioredoxin f2 from Chlamydomonas reinhardtii Reveals Distinct Surface Properties

Lemaire S., Tedesco D., Crozet P., Michelet L., Fermani S., Zaffagnini M., Henri J. Antioxidants (2018)

Comments Off on Crystal Structure of Chloroplastic Thioredoxin f2 from Chlamydomonas reinhardtii Reveals Distinct Surface Properties
23 November 2018
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