PUBLICATIONS

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PRESCOTT: a population aware, epistatic, and structural model accurately predicts missense effects

Tekpinar, M., David, L., Henry, T., Carbone, A. Genome Biology (2025)

Teams: Analytical Genomics

Functional recoding of Chlamydomonas reinhardtii thioredoxin type-h into photosynthetic type-f by switching selectivity determinants

Lemaire, S., Lombardi, G., Mancini, A., Carbone, A., Henri, J. Frontiers in Plant Science (2025)

Teams: Analytical Genomics

Action of the Euclidean versus projective group on an agent’s internal space in curiosity driven exploration

Sergeant-Perthuis, G., Ruet, N., Ognibene, D., Tisserand, Y., Williford, K., Rudrauf, D. Biological Cybernetics (2025)

Teams: Analytical Genomics

The role of ribosomal protein networks in ribosome dynamics

Timsit, Y., Sergeant-Perthuis, G., Bennequin, D. Nucleic Acids Research (2025)

Teams: Analytical Genomics

Fast and Functional Structured Data Generators Rooted in Out-of-Equilibrium Physics

Carbone, A., Decelle, A., Rosset, L., Seoane, B. IEEE Transactions on Pattern Analysis and Machine Intelligence (2024)

Teams: Analytical Genomics

Integrative spatial and genomic analysis of tumor heterogeneity with Tumoroscope

Shafighi, S., Geras, A., Jurzysta, B., Sahaf Naeini, A., Filipiuk, I., Rączkowska, A., Toosi, H., Koperski, L., Thrane, K., Engblom, C., Mold, JE., Chen, X., Hartman, J., Nowis, D., Carbone, A., Lagergre, J., Szczurek, E. Nature Communications volume (2024)

Teams: Analytical Genomics

SENSE-PPI reconstructs interactomes within, across, and between species at the genome scale

Volzhenin, K., Bittner, L., Carbone, A. iScience (2024)

Teams: Analytical Genomics

EncoMPASS: an Encyclopedia of Membrane Proteins Analyzed by Structure and Symmetry

Aleksandrova, A., Sarti, E., Forrest, L. Structure (2024)

Teams: Analytical Genomics

Histone H1 protects telomeric repeats from H3K27me3 invasion in Arabidopsis

Teano, G., Concia, L., Wolff, L., Carron, L., Biocanin, I., Adamusová, K., Fojtová, M., Bourge, M., Kramdi, A., Colot, V., Grossniklaus, U., Bowler, C., Baroux, C., Carbone, A., Probst, A., Schrumpfová, P., Fajkus, J., Amiard, S., Grob, S., Bourbousse, C., Barneche, F. Cell Reports (2023)

Teams: Analytical Genomics

LEVELNET to visualize, explore, and compare protein–protein interaction networks

Mohseni Behbahani, Y., Saighi, P., Corsi, F., Laine, E., Carbone, A. PROTEOMICS (2023)

Teams: Analytical Genomics