PUBLICATIONS

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Interspecific interactions and aging: Prediction of gerogenic bacteria and critical human protein targets of microbial infections

Dai, Y., Boussaguet, N., Teulière, J., Bonnefous, H., Budzinski, E., Lopez, P., Haraoui, L., Bapteste, E. Mechanisms of Ageing and Development (2025)

Teams: Adaptation, Intégration, Reticulation, Evolution (AIRE)

Gene expression and co-expression heterogeneity patterns and biodemography analyses during the cell cycle encourage aging studies in archaea

Dai, Y., Gomez-Raya-Vilanova, M., Teulière, J., Toucourou, M., Corel, E., Haraoui, L., Lopez, P., Lapointe, F., Franceschi, C., Baudisch, A., Bhattacharya, D., Cvirkaite-Krupovic, V., Krupovic, M., Bapteste, E. GeroScience (2025)

Teams: Adaptation, Intégration, Reticulation, Evolution (AIRE)

Transcriptional landscape of the cell cycle in a model thermoacidophilic archaeon reveals similarities to eukaryotes

Gomez-Raya-Vilanova, M., Teulière, J., Medvedeva, S., Dai, Y., Corel, E., Lopez, P., Lapointe, F., Bhattacharya, D., Haraoui, L., Turc, E., Monot, M., Cvirkaite-Krupovic, V., Bapteste, E., Krupovic, M. Nature Communications (2025)

Teams: Adaptation, Intégration, Reticulation, Evolution (AIRE)

Critical Assessment of Methods for Predicting the 3D Structure of Proteins and Protein Complexes

Wodak, S., Vajda, S., Lensink, M., Kozakov, D., Bates, P. Annual Review of Biophysics (2023)

Teams: Adaptation, Intégration, Reticulation, Evolution (AIRE)

CD44 alternative splicing senses intragenic DNA methylation in tumors via direct and indirect mechanisms

Batsché, E., Yi, J., Mauger, O., Kornobis, E., Hopkins, B., Hanmer-Lloyd, C., Muchardt, C. Nucleic Acids Research (2021)

Teams: Adaptation, Intégration, Reticulation, Evolution (AIRE)